SampleNames: EF1_C1_1 EF1_E1_1 EF1_C1_2 EF1_E1_2 Sptlc1_C1_1 Sptlc1_E1_1 Sptlc1_C1_2 Sptlc1_E1_2 EF1_C2_1 EF1_E2_1 EF1_C2_2 EF1_E2_2 Sptlc1_C2_1 Sptlc1_E2_1 Sptlc1_C2_2 Sptlc1_E2_2 EF1_C3_1 EF1_E3_1 EF1_C3_2 EF1_E3_2 Sptlc1_C3_1 Sptlc1_E3_1 Sptlc1_C3_2 Sptlc1_E3_2 EF1_C4_1 EF1_E4_1 EF1_C4_2 EF1_E4_2 Sptlc1_C4_1 Sptlc1_E4_1 Sptlc1_C4_2 Sptlc1_E4_2 EF1_C5_1 EF1_E5_1 EF1_C5_2 EF1_E5_2 Sptlc1_C5_1 Sptlc1_E5_1 Sptlc1_C5_2 Sptlc1_E5_2 EF1_C6_1 EF1_E6_1 EF1_C6_2 EF1_E6_2 Sptlc1_C6_1 Sptlc1_E6_1 Sptlc1_C6_2 Sptlc1_E6_2 EF1_C7_1 EF1_E7_1 EF1_C7_2 EF1_E7_2 Sptlc1_C7_1 Sptlc1_E7_1 Sptlc1_C7_2 Sptlc1_E7_2 EF1_C8_1 EF1_E8_1 EF1_C8_2 EF1_E8_2 Sptlc1_C8_1 Sptlc1_E8_1 Sptlc1_C8_2 Sptlc1_E8_2 Logistic_a: 1734.24 1553.13 1788.66 1726.28 1578.48 1573.31 1664.97 1483.89 1635.01 1695.09 1741.7 1627.32 1781.23 1522.57 2616.82 1523.59 1749.01 1702.31 1819.63 1800.17 1618.21 1569.53 1615.08 1628.11 1629.83 1630.67 1646.9 1645.4 2087.86 1488.14 2347.93 1577.94 1647.55 1590.39 1683.27 1604.81 1468.25 1761.69 1533.11 1694.47 1524.57 1796.02 1612.31 1795.23 1557.62 1594.25 1470.47 1515.84 1672.17 1553.83 1710.91 1678.96 1508.32 75989.5 1429.79 11082.4 1597.85 1557.08 1639.49 1651.38 1519.2 1421.91 1628.73 1419.07 Logistic_b: -13.3942 -13.8575 -13.5656 -13.8659 -18.7927 -18.08 -18.4941 -18.8319 -14.4038 -14.2084 -14.4633 -14.1982 -17.7401 -18.5134 -17.1375 -18.6559 -14.1402 -13.8813 -14.1219 -13.9092 -18.5625 -18.4131 -18.6044 -18.5365 -14.2067 -14.2175 -14.3484 -14.2515 -17.3436 -18.8314 -17.4717 -18.4144 -14.0474 -14.4104 -14.0742 -14.4312 -18.9506 -18.0646 -18.32 -18.4105 -13.7879 -14.5662 -13.9589 -14.4703 -17.7062 -18.8424 -17.8154 -18.0144 -13.7015 -14.6742 -13.5975 -14.7755 -18.0654 -17.4184 -17.9576 -17.2252 -14.1654 -13.6866 -14.2215 -13.7102 -18.542 -18.1059 -18.0202 -18.4498 Logistic_X0: 25.6508 26.5832 25.7633 26.4721 39.9779 40.3323 40.6178 40.025 27.3822 27.0994 27.5351 26.9967 41.8723 39.7952 43.1498 39.7684 26.7584 26.2084 26.7599 26.3585 39.8385 39.7487 40.1157 39.8552 26.4221 26.9102 26.3971 26.8228 42.3246 39.909 42.7645 40.2922 26.6044 27.2719 26.5831 27.1792 39.8696 41.4033 39.9664 41.0624 26.3455 27.3911 26.4558 27.4184 40.405 40.168 40.0876 40.4063 26.1564 27.8243 26.0184 27.9365 39.3367 54.8072 39.5136 49.029 27.1322 26.1811 26.9828 26.2433 40.3243 39.4288 40.8024 39.5122 Logistic_Y0: 2468.92 2455.68 2461.16 2475.08 2440.36 2428.48 2420.98 2403.65 2477.86 2502.87 2551.85 2490.3 2479.7 2447.51 2430.67 2417.23 2427.45 2459.66 2479.61 2493.84 2433.55 2432.81 2436.83 2421.95 2423.34 2477.83 2429.77 2450.8 2458.04 2420.47 2424.69 2426.14 2440.18 2460.72 2432.12 2462.33 2444.99 2444.89 2433.09 2420 2437.33 2456.84 2422.85 2413.45 2501.97 2447.63 2439.34 2438.75 2447.66 2424.48 2423.55 2410.67 2448.43 2438.06 2466.19 2465.33 2419.69 2447.92 2422.11 2425.41 2444.96 2427.05 2423.08 2424.29 Logistic_Pvalue: 0 0 0 0 0 0 0 0 0 0 1.11E-16 0 0 1.11E-16 2.22E-16 0 1.11E-16 0 1.11E-16 0 0 1.11E-16 0 1.11E-16 0 2.22E-16 1.11E-16 0 1.11E-16 1.11E-16 0 0 0 0 2.22E-16 0 0 1.11E-16 0 1.11E-16 1.11E-16 2.22E-16 2.22E-16 0 0 0 0 1.11E-16 2.22E-16 0 1.11E-16 0 0 1.11E-16 1.11E-16 0 1.11E-16 0 2.22E-16 1.11E-16 0 0 0 1.11E-16 Noise(SPE): 1.58344 1.31374 1.55346 1.44317 0.898719 0.939354 0.821894 0.899893 1.26559 1.22148 1.37863 1.41625 1.12269 0.857003 0.884814 0.952584 1.52403 1.3949 1.323 1.46366 0.838021 0.693828 0.95497 0.761559 1.49717 1.26957 1.40538 1.29192 1.35177 0.914245 0.827423 0.775592 1.52702 1.34707 1.35903 1.43234 0.868214 0.881991 0.768877 0.879066 1.3897 1.38115 1.22529 1.36905 1.00676 0.929883 0.898287 0.974014 1.64167 1.19455 1.35955 1.31673 0.954262 28.3396 0.91073 34.6291 1.5163 1.50261 1.44244 1.34262 0.811369 0.902096 0.775827 0.866601 EndofExpPhase(SDM): 2772.07 2729.02 2774.63 2778.94 2732.58 2718.14 2728.52 2678.44 2767.76 2802.64 2860.9 2778.06 2806.73 2728.79 2908.61 2699 2736.47 2759.37 2801.03 2810.89 2732.61 2722.54 2735.41 2722.78 2711.57 2766.25 2721.57 2741.96 2840.07 2696.04 2854.78 2717.42 2730.91 2742.73 2729.27 2746.98 2717.12 2769.2 2715.89 2732.79 2705.38 2775.96 2707.01 2732.03 2787.87 2742.88 2709.49 2717.69 2741.29 2700.94 2723.53 2709.77 2726.1 16351.4 2729.17 4491.03 2702.11 2721.29 2712.1 2715.43 2725.68 2688.89 2722.8 2686.32 CP(SPE): 15.2126 15.9551 15.3239 15.8798 26.8646 26.7516 26.9114 27.0089 16.653 16.2864 16.8062 16.4359 27.6397 26.5654 27.0678 26.7801 16.2591 15.7078 16.0424 15.8052 26.5035 26.1308 26.9035 26.3543 16.1522 16.2662 16.1325 16.2425 27.7172 26.9489 27.1306 26.6419 16.1834 16.6937 16.0277 16.7093 26.9345 27.1859 26.3992 27.2286 15.8575 16.7434 15.8157 16.6959 26.6879 27.0553 26.4616 26.8701 15.7787 17.0696 15.3934 17.2192 26.1664 34.8356 26.2297 35.0828 16.6006 15.7651 16.4534 15.6197 26.8592 26.2556 26.6897 26.4566 CP(SDM): 22.8444 23.7808 22.9835 23.6833 36.9464 37.1443 37.4843 36.9966 24.6147 24.3195 24.7647 24.2251 38.4944 36.7286 39.5369 36.729 23.999 23.4507 23.9965 23.5911 36.7774 36.6678 37.0406 36.7882 23.7113 24.1516 23.718 24.0803 38.8261 36.8893 39.2575 37.1695 23.8411 24.517 23.8278 24.438 36.8732 38.1276 36.8518 37.8792 23.5529 24.6563 23.689 24.6612 37.1388 37.1307 36.8684 37.2 23.3647 25.0685 23.2182 25.1902 36.2247 50.2979 36.3675 44.9463 24.3397 23.3835 24.2176 23.4443 37.2221 36.3171 37.5658 36.4562 DynamicThreshold: 2621.28 2593.01 2618.67 2627.73 2586.92 2573.78 2575.16 2541.49 2623.44 2653.37 2707.06 2634.89 2643.78 2588.58 2670.08 2558.59 2582.72 2610.21 2640.98 2653.1 2583.49 2578.03 2586.6 2572.75 2568.2 2622.68 2576.38 2597.03 2649.73 2558.71 2640.15 2572.17 2586.31 2602.4 2581.37 2605.37 2581.49 2607.49 2574.88 2576.84 2572.05 2617.09 2565.54 2573.43 2645.42 2595.72 2574.86 2578.71 2595.3 2563.31 2574.22 2560.88 2587.75 9408.9 2598.14 3495.5 2561.66 2585.36 2567.83 2571.09 2585.72 2558.42 2573.33 2555.74 LowerCycleNumber: 15 16 15 16 27 27 27 27 17 16 17 16 28 27 27 27 16 16 16 16 27 26 27 26 16 16 16 16 28 27 27 27 16 17 16 17 27 27 26 27 16 17 16 17 27 27 26 27 16 17 15 17 26 35 26 35 17 16 16 16 27 26 27 26 UpperCycleNumber: 23 24 23 24 37 37 37 37 25 24 25 24 38 37 40 37 24 23 24 24 37 37 37 37 24 24 24 24 39 37 39 37 24 25 24 24 37 38 37 38 24 25 24 25 37 37 37 37 23 25 23 25 36 40 36 40 24 23 24 23 37 36 38 36 PointsForRegression: 9 9 9 9 11 11 11 11 9 9 9 9 11 11 14 11 9 8 9 9 11 12 11 12 9 9 9 9 12 11 13 11 9 9 9 8 11 12 12 12 9 9 9 9 11 11 12 11 8 9 9 9 11 6 11 6 8 8 9 8 11 11 12 11 Number_OfRegressionWindows: 347 339 346 341 1546 1694 1640 1688 348 322 308 353 1600 1654 44 1662 336 137 338 348 1620 3503 1334 3650 335 341 344 346 3632 1663 7459 1708 221 328 314 141 1716 3610 3643 2649 346 332 344 327 1690 1695 3574 1712 138 335 350 299 1588 8 1653 8 134 124 344 142 1712 1647 3525 1623 WeightedAverage_OfPvalue: 0.00277514 0.00332249 0.00337927 0.00303052 0.00228407 0.00215825 0.00201542 0.0017708 0.00318076 0.00324041 0.00372963 0.00286634 0.00243688 0.00208565 0.00183778 0.00179025 0.00345606 0.00375243 0.00300539 0.00303687 0.00181121 0.00131186 0.002247 0.00131882 0.00302224 0.00299924 0.00332437 0.00294831 0.00140878 0.00198983 0.00134683 0.00178308 0.00381249 0.00317168 0.00346698 0.00422929 0.00187331 0.00157061 0.0013059 0.00141484 0.00303213 0.00356068 0.00302576 0.00343387 0.00180336 0.0018549 0.00163762 0.0017597 0.00418596 0.00348499 0.00305627 0.00362346 0.00215298 0.00879792 0.00176439 0.013505 0.00416287 0.00477407 0.00323337 0.00419485 0.00174762 0.0023491 0.00156571 0.00207961 Stderr_OfWeightedPvalue: 0.000637075 0.000623244 0.000642322 0.000607865 0.000207063 0.00019424 0.000193403 0.000192259 0.000634287 0.000581904 0.000615303 0.000675519 0.000202286 0.000213236 0.000884013 0.000194167 0.000663899 0.00120767 0.000594328 0.00061521 0.000212172 0.000115412 0.000219475 0.000120865 0.000552847 0.00057998 0.000641167 0.000632917 0.000114265 0.000220805 7.40E-05 0.000186196 0.000819247 0.000589091 0.000556198 0.00122002 0.000193082 0.000124088 0.000114795 0.000140561 0.000619743 0.000638775 0.000667368 0.000689212 0.000200197 0.000189997 0.000119308 0.000194469 0.00130386 0.000614354 0.000606096 0.000769493 0.000215972 0.00351567 0.000201702 0.00482583 0.00111401 0.00115791 0.000619323 0.00114893 0.000189955 0.000209025 0.000125815 0.000231179 WeightedAverage_OfEfficiency: 0.755777 0.723067 0.754868 0.759858 0.78105 0.736218 0.693766 0.663995 0.735163 0.782232 0.852902 0.756265 0.845883 0.713474 0.73687 0.702389 0.839996 0.818157 0.789714 0.694914 0.706232 0.631266 0.71144 0.68484 0.740994 0.763198 0.784881 0.777365 0.654491 0.672826 0.740165 0.68606 0.75929 0.811001 0.821813 0.726754 0.741903 0.717606 0.697923 0.634753 0.720754 0.823759 0.740561 0.79702 0.668008 0.714411 0.695368 0.657583 0.837281 0.786464 0.789068 0.812819 0.705054 0.816663 0.696283 0.90528 0.835158 0.856374 0.754128 0.762014 0.697053 0.834825 0.686791 0.695071 Stderr_OfWeightedEfficiency: 0.00400776 0.00506832 0.00439123 0.00488493 0.00360938 0.00211644 0.00289411 0.00202395 0.00478479 0.00679353 0.00759619 0.00389514 0.00397538 0.00363022 0.0307293 0.00172071 0.00641434 0.00678816 0.00537279 0.00454598 0.00350301 0.00153176 0.00403002 0.00132344 0.00435162 0.00582084 0.0057106 0.00424283 0.00148047 0.00251195 0.00158442 0.00224299 0.00573902 0.00608111 0.00667672 0.00742659 0.0029542 0.00247284 0.00143003 0.00140068 0.00461915 0.0062478 0.00447661 0.00613102 0.00276624 0.00258425 0.00236053 0.0017389 0.00850409 0.00594452 0.00498987 0.0064883 0.00431481 0.0414074 0.00182625 0.0441294 0.00964574 0.0116158 0.00502409 0.00803035 0.00223875 0.00305924 0.00260952 0.00284261 CT: 21.539 22.4641 21.6854 22.3726 35.4116 35.5435 35.9023 35.4632 23.2999 23.003 23.4471 22.9144 36.8054 35.1808 37.7402 35.1931 22.6955 22.1541 22.6901 22.2891 35.2309 35.1131 35.4873 35.2386 22.4295 22.8456 22.4473 22.7812 37.0857 35.3604 37.5063 35.5942 22.5387 23.2087 22.5272 23.1361 35.3539 36.4819 35.2824 36.2738 22.2432 23.3531 22.3855 23.3495 35.5066 35.5922 35.2571 35.5918 22.0585 23.7527 21.909 23.8768 34.6628 48.048 34.7904 42.9552 23.0207 22.0747 22.9094 22.1327 35.6554 34.7545 35.9402 34.9154 TotalSampleNumber: 64 ReplicateSampleNames: EF1_C1 EF1_E1 Sptlc1_C1 Sptlc1_E1 EF1_C2 EF1_E2 Sptlc1_C2 Sptlc1_E2 EF1_C3 EF1_E3 Sptlc1_C3 Sptlc1_E3 EF1_C4 EF1_E4 Sptlc1_C4 Sptlc1_E4 EF1_C5 EF1_E5 Sptlc1_C5 Sptlc1_E5 EF1_C6 EF1_E6 Sptlc1_C6 Sptlc1_E6 EF1_C7 EF1_E7 Sptlc1_C7 Sptlc1_E7 EF1_C8 EF1_E8 Sptlc1_C8 Sptlc1_E8 AverageEfficiency_OfReplicateSamples 0.755323 0.741462 0.737408 0.700107 0.794033 0.769248 0.791376 0.707931 0.814855 0.756536 0.708836 0.658053 0.762938 0.770281 0.697328 0.679443 0.790552 0.768878 0.719913 0.676179 0.730658 0.810389 0.681688 0.685997 0.813175 0.799642 0.700669 0.860972 0.794643 0.809194 0.691922 0.764948 StdErr_OfReplicateSamplesEfficiency: 0.000454468 0.0183959 0.0436419 0.0361113 0.0588693 0.0129833 0.0545065 0.00554215 0.025141 0.0616216 0.0026044 0.026787 0.0219436 0.00708349 0.042837 0.00661688 0.0312614 0.0421236 0.0219901 0.0414263 0.00990384 0.0133695 0.0136803 0.0284141 0.0241062 0.0131774 0.00438552 0.0443085 0.0405153 0.0471801 0.00513137 0.0698773 CoefficientVariation(CV%)_OfReplicateSamplesEfficiencies: 0.0850914 3.5087 8.36972 7.29447 10.4849 2.38689 9.74048 1.10714 4.36332 11.5191 0.519609 5.75677 4.06755 1.30051 8.68755 1.37726 5.59234 7.74789 4.31979 8.66421 1.91692 2.33312 2.83808 5.85769 4.19238 2.33049 0.885162 7.27801 7.21044 8.24558 1.0488 12.9187 AverageCT_OfReplicateSamples: 21.6122 22.4184 35.6569 35.5033 23.3735 22.9587 37.2728 35.187 22.6928 22.2216 35.3591 35.1759 22.4384 22.8134 37.296 35.4773 22.533 23.1724 35.3181 36.3779 22.3144 23.3513 35.3818 35.592 21.9837 23.8147 34.7266 45.5016 22.9651 22.1037 35.7978 34.8349 StdErr_OfReplicateSamplesCT: 0.073187 0.0457416 0.24533 0.040143 0.0736258 0.0443328 0.467385 0.00616826 0.00268949 0.0674921 0.128197 0.06274 0.00885556 0.0322247 0.210292 0.116874 0.00572245 0.0362837 0.0357887 0.104055 0.0711116 0.00182965 0.124742 0.000235715 0.0747362 0.0620267 0.0638229 2.54637 0.0556304 0.0289819 0.142402 0.0804417 CV%_OfReplicateSamplesCTs: 0.478906 0.288551 0.97302 0.159903 0.445472 0.273081 1.77336 0.0247911 0.0167609 0.429529 0.512732 0.25224 0.0558135 0.199763 0.797398 0.465889 0.0359152 0.22144 0.143306 0.404521 0.450683 0.0110808 0.498595 0.00093659 0.480778 0.368339 0.259914 7.91425 0.342578 0.185428 0.562569 0.326574 GeneNames EF1 Sptlc1 AverageEfficiency_OfGenes: 0.780113 0.716423 Stdev_OfGenesEfficiency: 0.00667824 0.0128217 MeanCV%_OfGenesEfficiencies 4.83033 5.41646 MeanCV%_OfGenesCTs 0.267758 0.941875 EF1_C1 EF1_E1 EF1_C2 EF1_E2 EF1_C3 EF1_E3 EF1_C4 EF1_E4 EF1_C5 EF1_E5 EF1_C6 EF1_E6 EF1_C7 EF1_E7 EF1_C8 EF1_E8 21.6122 22.4184 23.3735 22.9587 22.6928 22.2216 22.4384 22.8134 22.533 23.1724 22.3144 23.3513 21.9837 23.8147 22.9651 22.1037 3.86613E-06 2.42866E-06 1.40011E-06 1.77848E-06 2.07321E-06 2.72053E-06 2.40081E-06 1.93392E-06 2.27334E-06 1.57228E-06 2.57877E-06 1.41815E-06 3.12058E-06 1.08559E-06 1.77193E-06 2.91194E-06 Sptlc1_C1 Sptlc1_E1 Sptlc1_C2 Sptlc1_E2 Sptlc1_C3 Sptlc1_E3 Sptlc1_C4 Sptlc1_E4 Sptlc1_C5 Sptlc1_E5 Sptlc1_C6 Sptlc1_E6 Sptlc1_C7 Sptlc1_E7 Sptlc1_C8 Sptlc1_E8 35.6569 35.5033 37.2728 35.187 35.3591 35.1759 37.296 35.4773 35.3181 36.3779 35.3818 35.592 34.7266 45.5016 35.7978 34.8349 4.3055E-09 4.67802E-09 1.79843E-09 5.54976E-09 5.05702E-09 5.58314E-09 1.77603E-09 4.74419E-09 5.17029E-09 2.91649E-09 4.99539E-09 4.45914E-09 7.11697E-09 2.10969E-11 3.98993E-09 6.71251E-09 0.001113645 0.001926176 0.00128449 0.003120502 0.002439224 0.00205222 0.000739765 0.002453144 0.00227431 0.001854945 0.001937119 0.003144325 0.002280653 1.94335E-05 0.002251743 0.002305171